Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Prob1-201ENSMUST00000097619 3021 ntBASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tmem40Q4FJU9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.08□□□□□ -0.31
Tmem40Q4FJU9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.08□□□□□ -0.31
Tmem40Q4FJU9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Tmem40Q4FJU9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Tmem40Q4FJU9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Tmem40Q4FJU9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Gm11025-201ENSMUST00000140773 466 ntBASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tmem40Q4FJU9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tmem40Q4FJU9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms