Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Gm20049-201ENSMUST00000219950 730 ntBASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Efs-202ENSMUST00000227037 2540 ntBASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hddc2Q3SXD3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hddc2Q3SXD3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hddc2Q3SXD3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Hddc2Q3SXD3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hddc2Q3SXD3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hddc2Q3SXD3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hddc2Q3SXD3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Gm43183-201ENSMUST00000200632 547 ntBASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hddc2Q3SXD3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hddc2Q3SXD3 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hddc2Q3SXD3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms