Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pkd1l3Q2EG98 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Pkd1l3Q2EG98 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pkd1l3Q2EG98 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pkd1l3Q2EG98 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.8□□□□□ -0.2
Pkd1l3Q2EG98 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.8□□□□□ -0.2
Pkd1l3Q2EG98 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pkd1l3Q2EG98 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pkd1l3Q2EG98 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pkd1l3Q2EG98 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Auts2-212ENSMUST00000178555 309 ntBASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Gm11025-201ENSMUST00000140773 466 ntBASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pkd1l3Q2EG98 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Gm12008-201ENSMUST00000117791 755 ntBASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pkd1l3Q2EG98 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pkd1l3Q2EG98 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pkd1l3Q2EG98 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Pkd1l3Q2EG98 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Pkd1l3Q2EG98 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pkd1l3Q2EG98 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.77□□□□□ -0.2
Pkd1l3Q2EG98 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pkd1l3Q2EG98 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Pkd1l3Q2EG98 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pkd1l3Q2EG98 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 Gm15427-201ENSMUST00000117288 531 ntBASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pkd1l3Q2EG98 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms