Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npas1P97459 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.95□□□□□ -0.34
Npas1P97459 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npas1P97459 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npas1P97459 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npas1P97459 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.94□□□□□ -0.34
Npas1P97459 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Npas1P97459 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.94□□□□□ -0.34
Npas1P97459 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.94□□□□□ -0.34
Npas1P97459 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.94□□□□□ -0.34
Npas1P97459 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.94□□□□□ -0.34
Npas1P97459 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.94□□□□□ -0.34
Npas1P97459 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Npas1P97459 Gm21814-202ENSMUST00000203277 873 ntBASIC12.94□□□□□ -0.34
Npas1P97459 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Npas1P97459 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.94□□□□□ -0.34
Npas1P97459 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Npas1P97459 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npas1P97459 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Rubie-203ENSMUST00000227803 2430 ntBASIC12.93□□□□□ -0.34
Npas1P97459 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.93□□□□□ -0.34
Npas1P97459 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.93□□□□□ -0.34
Npas1P97459 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.93□□□□□ -0.34
Npas1P97459 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.93□□□□□ -0.34
Npas1P97459 Gm27463-201ENSMUST00000183569 57 ntBASIC12.93□□□□□ -0.34
Npas1P97459 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.93□□□□□ -0.34
Npas1P97459 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.93□□□□□ -0.34
Npas1P97459 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.93□□□□□ -0.34
Npas1P97459 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Npas1P97459 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npas1P97459 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Npas1P97459 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Npas1P97459 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Npas1P97459 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Npas1P97459 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Npas1P97459 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Npas1P97459 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Npas1P97459 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.92□□□□□ -0.34
Npas1P97459 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Npas1P97459 Mir5122-201ENSMUST00000175004 89 ntBASIC12.92□□□□□ -0.34
Npas1P97459 Gm20760-201ENSMUST00000179197 648 ntBASIC12.92□□□□□ -0.34
Npas1P97459 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Npas1P97459 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Npas1P97459 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Npas1P97459 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Npas1P97459 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Npas1P97459 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Npas1P97459 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Npas1P97459 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Npas1P97459 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Npas1P97459 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Npas1P97459 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.92□□□□□ -0.34
Npas1P97459 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms