Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pdlim4P70271 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Pdlim4P70271 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pdlim4P70271 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.81□□□□□ -0.36
Pdlim4P70271 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.81□□□□□ -0.36
Pdlim4P70271 Gm44357-201ENSMUST00000195897 142 ntBASIC12.81□□□□□ -0.36
Pdlim4P70271 Gm19658-201ENSMUST00000196231 138 ntBASIC12.81□□□□□ -0.36
Pdlim4P70271 Gm44367-201ENSMUST00000196836 138 ntBASIC12.81□□□□□ -0.36
Pdlim4P70271 Gm44350-201ENSMUST00000197197 138 ntBASIC12.81□□□□□ -0.36
Pdlim4P70271 Gm44390-201ENSMUST00000197533 144 ntBASIC12.81□□□□□ -0.36
Pdlim4P70271 Gm44313-201ENSMUST00000198018 138 ntBASIC12.81□□□□□ -0.36
Pdlim4P70271 Gm44486-201ENSMUST00000198508 138 ntBASIC12.81□□□□□ -0.36
Pdlim4P70271 Gm44314-201ENSMUST00000199263 138 ntBASIC12.81□□□□□ -0.36
Pdlim4P70271 Gm44394-201ENSMUST00000199558 138 ntBASIC12.81□□□□□ -0.36
Pdlim4P70271 Gm44484-201ENSMUST00000199873 138 ntBASIC12.81□□□□□ -0.36
Pdlim4P70271 Gm44466-201ENSMUST00000200264 138 ntBASIC12.81□□□□□ -0.36
Pdlim4P70271 Gm44359-201ENSMUST00000200671 138 ntBASIC12.81□□□□□ -0.36
Pdlim4P70271 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.81□□□□□ -0.36
Pdlim4P70271 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pdlim4P70271 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Pdlim4P70271 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.81□□□□□ -0.36
Pdlim4P70271 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Pdlim4P70271 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.81□□□□□ -0.36
Pdlim4P70271 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pdlim4P70271 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Pdlim4P70271 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Pdlim4P70271 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Pdlim4P70271 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.8□□□□□ -0.36
Pdlim4P70271 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Pdlim4P70271 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.8□□□□□ -0.36
Pdlim4P70271 Gm6296-201ENSMUST00000222599 943 ntBASIC12.8□□□□□ -0.36
Pdlim4P70271 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.8□□□□□ -0.36
Pdlim4P70271 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pdlim4P70271 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim4P70271 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Pdlim4P70271 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pdlim4P70271 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pdlim4P70271 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Pdlim4P70271 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Pdlim4P70271 Gm13884-201ENSMUST00000118103 829 ntBASIC12.79□□□□□ -0.36
Pdlim4P70271 Gm13418-201ENSMUST00000119097 944 ntBASIC12.79□□□□□ -0.36
Pdlim4P70271 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.79□□□□□ -0.36
Pdlim4P70271 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.79□□□□□ -0.36
Pdlim4P70271 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.79□□□□□ -0.36
Pdlim4P70271 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.79□□□□□ -0.36
Pdlim4P70271 Gm19164-201ENSMUST00000210667 640 ntBASIC12.79□□□□□ -0.36
Pdlim4P70271 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms