Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
ThraP63058 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ThraP63058 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
ThraP63058 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ThraP63058 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ThraP63058 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
ThraP63058 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
ThraP63058 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ThraP63058 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
ThraP63058 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.58■□□□□ 0.09
ThraP63058 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.58■□□□□ 0.09
ThraP63058 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ThraP63058 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
ThraP63058 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ThraP63058 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ThraP63058 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ThraP63058 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
ThraP63058 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ThraP63058 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.58■□□□□ 0.08
ThraP63058 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.58■□□□□ 0.08
ThraP63058 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.58■□□□□ 0.08
ThraP63058 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.58■□□□□ 0.08
ThraP63058 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.58■□□□□ 0.08
ThraP63058 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.58■□□□□ 0.08
ThraP63058 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ThraP63058 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ThraP63058 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ThraP63058 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
ThraP63058 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ThraP63058 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
ThraP63058 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ThraP63058 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ThraP63058 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
ThraP63058 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.58■□□□□ 0.08
ThraP63058 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
ThraP63058 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ThraP63058 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ThraP63058 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
ThraP63058 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.57■□□□□ 0.08
ThraP63058 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
ThraP63058 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.57■□□□□ 0.08
ThraP63058 Gm13418-201ENSMUST00000119097 944 ntBASIC15.57■□□□□ 0.08
ThraP63058 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.57■□□□□ 0.08
ThraP63058 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.57■□□□□ 0.08
ThraP63058 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.57■□□□□ 0.08
ThraP63058 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
ThraP63058 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
ThraP63058 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ThraP63058 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ThraP63058 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Gm12497-201ENSMUST00000138778 237 ntBASIC15.56■□□□□ 0.08
ThraP63058 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.56■□□□□ 0.08
ThraP63058 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.56■□□□□ 0.08
ThraP63058 Gm7230-201ENSMUST00000173026 815 ntBASIC15.56■□□□□ 0.08
ThraP63058 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Gm37935-201ENSMUST00000192012 982 ntBASIC15.56■□□□□ 0.08
ThraP63058 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.56■□□□□ 0.08
ThraP63058 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
ThraP63058 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ThraP63058 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ThraP63058 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ThraP63058 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms