Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11□□□□□ -0.65
Rpl39P62892 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11□□□□□ -0.65
Rpl39P62892 Gm10653-202ENSMUST00000139570 835 ntBASIC11□□□□□ -0.65
Rpl39P62892 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11□□□□□ -0.65
Rpl39P62892 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11□□□□□ -0.65
Rpl39P62892 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Rpl39P62892 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Rpl39P62892 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
Rpl39P62892 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11□□□□□ -0.65
Rpl39P62892 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11□□□□□ -0.65
Rpl39P62892 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11□□□□□ -0.65
Rpl39P62892 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Gm45760-201ENSMUST00000212190 1782 ntBASIC11□□□□□ -0.65
Rpl39P62892 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rpl39P62892 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Rpl39P62892 Gm13168-201ENSMUST00000121771 632 ntBASIC10.99□□□□□ -0.65
Rpl39P62892 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC10.99□□□□□ -0.65
Rpl39P62892 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC10.99□□□□□ -0.65
Rpl39P62892 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Mir5122-201ENSMUST00000175004 89 ntBASIC10.99□□□□□ -0.65
Rpl39P62892 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC10.99□□□□□ -0.65
Rpl39P62892 Gm2274-201ENSMUST00000184539 609 ntBASIC10.99□□□□□ -0.65
Rpl39P62892 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rpl39P62892 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpl39P62892 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rpl39P62892 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Gm5357-201ENSMUST00000212720 1924 ntBASIC10.98□□□□□ -0.65
Rpl39P62892 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Rpl39P62892 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Rpl39P62892 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Rpl39P62892 Gm26039-201ENSMUST00000158152 144 ntBASIC10.98□□□□□ -0.65
Rpl39P62892 Gm6257-201ENSMUST00000163864 910 ntBASIC10.98□□□□□ -0.65
Rpl39P62892 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Rpl39P62892 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.98□□□□□ -0.65
Rpl39P62892 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC10.98□□□□□ -0.65
Rpl39P62892 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rpl39P62892 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Rpl39P62892 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Rpl39P62892 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rpl39P62892 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rpl39P62892 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Rpl39P62892 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpl39P62892 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Rpl39P62892 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms