Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrch1P62046 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lrch1P62046 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrch1P62046 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrch1P62046 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.06■□□□□ 0.48
Lrch1P62046 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.06■□□□□ 0.48
Lrch1P62046 Gm14928-201ENSMUST00000120198 477 ntBASIC18.06■□□□□ 0.48
Lrch1P62046 Gm15483-201ENSMUST00000120338 456 ntBASIC18.06■□□□□ 0.48
Lrch1P62046 Gm15321-201ENSMUST00000121290 288 ntBASIC18.06■□□□□ 0.48
Lrch1P62046 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.06■□□□□ 0.48
Lrch1P62046 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrch1P62046 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Lrch1P62046 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Lrch1P62046 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lrch1P62046 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrch1P62046 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Lrch1P62046 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Lrch1P62046 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrch1P62046 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrch1P62046 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrch1P62046 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrch1P62046 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrch1P62046 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrch1P62046 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrch1P62046 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrch1P62046 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Lrch1P62046 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.05■□□□□ 0.48
Lrch1P62046 Gm27533-201ENSMUST00000183800 152 ntBASIC18.05■□□□□ 0.48
Lrch1P62046 Gm44344-201ENSMUST00000200287 129 ntBASIC18.05■□□□□ 0.48
Lrch1P62046 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lrch1P62046 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.05■□□□□ 0.48
Lrch1P62046 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrch1P62046 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Lrch1P62046 Gm25857-201ENSMUST00000082788 129 ntBASIC18.05■□□□□ 0.48
Lrch1P62046 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrch1P62046 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrch1P62046 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrch1P62046 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrch1P62046 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrch1P62046 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Lrch1P62046 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrch1P62046 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrch1P62046 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.04■□□□□ 0.48
Lrch1P62046 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrch1P62046 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.04■□□□□ 0.48
Lrch1P62046 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrch1P62046 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrch1P62046 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrch1P62046 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Lrch1P62046 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Lrch1P62046 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.04■□□□□ 0.48
Lrch1P62046 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.04■□□□□ 0.48
Lrch1P62046 Gm24694-201ENSMUST00000180054 110 ntBASIC18.04■□□□□ 0.48
Lrch1P62046 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lrch1P62046 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.04■□□□□ 0.48
Lrch1P62046 Gm27663-201ENSMUST00000184839 110 ntBASIC18.04■□□□□ 0.48
Lrch1P62046 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lrch1P62046 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.04■□□□□ 0.48
Lrch1P62046 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.04■□□□□ 0.48
Lrch1P62046 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrch1P62046 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrch1P62046 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrch1P62046 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrch1P62046 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Lrch1P62046 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrch1P62046 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrch1P62046 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.03■□□□□ 0.48
Lrch1P62046 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Lrch1P62046 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Lrch1P62046 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.03■□□□□ 0.48
Lrch1P62046 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.03■□□□□ 0.48
Lrch1P62046 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Lrch1P62046 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Lrch1P62046 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lrch1P62046 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrch1P62046 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrch1P62046 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lrch1P62046 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrch1P62046 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrch1P62046 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.02■□□□□ 0.48
Lrch1P62046 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms