Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Tubgcp3P58854 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tubgcp3P58854 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Tubgcp3P58854 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tubgcp3P58854 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tubgcp3P58854 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.73■□□□□ 0.11
Tubgcp3P58854 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Tubgcp3P58854 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tubgcp3P58854 Gm28033-201ENSMUST00000184224 96 ntBASIC15.73■□□□□ 0.11
Tubgcp3P58854 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tubgcp3P58854 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tubgcp3P58854 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tubgcp3P58854 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tubgcp3P58854 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tubgcp3P58854 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tubgcp3P58854 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Tubgcp3P58854 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.73■□□□□ 0.11
Tubgcp3P58854 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.73■□□□□ 0.11
Tubgcp3P58854 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tubgcp3P58854 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tubgcp3P58854 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Tubgcp3P58854 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Gm8097-201ENSMUST00000117903 829 ntBASIC15.72■□□□□ 0.11
Tubgcp3P58854 Gm8344-201ENSMUST00000119813 856 ntBASIC15.72■□□□□ 0.11
Tubgcp3P58854 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubgcp3P58854 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.72■□□□□ 0.11
Tubgcp3P58854 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubgcp3P58854 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.71■□□□□ 0.11
Tubgcp3P58854 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubgcp3P58854 BC037039-201ENSMUST00000192003 2205 ntBASIC15.71■□□□□ 0.11
Tubgcp3P58854 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Tubgcp3P58854 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tubgcp3P58854 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Tubgcp3P58854 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tubgcp3P58854 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Tubgcp3P58854 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Tubgcp3P58854 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubgcp3P58854 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tubgcp3P58854 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tubgcp3P58854 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubgcp3P58854 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubgcp3P58854 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tubgcp3P58854 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tubgcp3P58854 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.7■□□□□ 0.1
Tubgcp3P58854 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubgcp3P58854 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms