Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Msh6P54276 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh6P54276 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.41■□□□□ 0.7
Msh6P54276 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Msh6P54276 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh6P54276 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Msh6P54276 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh6P54276 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh6P54276 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.41■□□□□ 0.7
Msh6P54276 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh6P54276 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh6P54276 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Msh6P54276 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.41■□□□□ 0.7
Msh6P54276 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Msh6P54276 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Msh6P54276 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.41■□□□□ 0.7
Msh6P54276 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.41■□□□□ 0.7
Msh6P54276 Gm27437-201ENSMUST00000183429 107 ntBASIC19.41■□□□□ 0.7
Msh6P54276 Gm5745-201ENSMUST00000183748 313 ntBASIC19.41■□□□□ 0.7
Msh6P54276 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.41■□□□□ 0.7
Msh6P54276 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh6P54276 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Msh6P54276 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh6P54276 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh6P54276 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh6P54276 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.4■□□□□ 0.7
Msh6P54276 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Msh6P54276 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.4■□□□□ 0.7
Msh6P54276 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh6P54276 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Msh6P54276 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh6P54276 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh6P54276 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Msh6P54276 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh6P54276 Mir6977-201ENSMUST00000184960 64 ntBASIC19.4■□□□□ 0.7
Msh6P54276 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Msh6P54276 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh6P54276 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Msh6P54276 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Msh6P54276 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Msh6P54276 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh6P54276 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Msh6P54276 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh6P54276 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Msh6P54276 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Msh6P54276 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.39■□□□□ 0.69
Msh6P54276 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.39■□□□□ 0.69
Msh6P54276 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh6P54276 Gm13223-201ENSMUST00000118609 747 ntBASIC19.39■□□□□ 0.69
Msh6P54276 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Msh6P54276 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC19.39■□□□□ 0.69
Msh6P54276 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.39■□□□□ 0.69
Msh6P54276 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh6P54276 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC19.39■□□□□ 0.69
Msh6P54276 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.39■□□□□ 0.69
Msh6P54276 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh6P54276 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh6P54276 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh6P54276 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Gm12017-201ENSMUST00000122453 1003 ntBASIC19.38■□□□□ 0.69
Msh6P54276 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.38■□□□□ 0.69
Msh6P54276 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC19.38■□□□□ 0.69
Msh6P54276 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC19.38■□□□□ 0.69
Msh6P54276 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Gm44616-201ENSMUST00000206417 1732 ntBASIC19.38■□□□□ 0.69
Msh6P54276 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh6P54276 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh6P54276 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh6P54276 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Msh6P54276 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh6P54276 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.37■□□□□ 0.69
Msh6P54276 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.37■□□□□ 0.69
Msh6P54276 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Msh6P54276 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh6P54276 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Msh6P54276 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Msh6P54276 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Msh6P54276 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh6P54276 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.37■□□□□ 0.69
Msh6P54276 Gm5779-201ENSMUST00000218467 910 ntBASIC19.37■□□□□ 0.69
Msh6P54276 AC140375.2-201ENSMUST00000225283 584 ntBASIC19.37■□□□□ 0.69
Msh6P54276 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh6P54276 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Msh6P54276 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh6P54276 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms