Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr4P51680 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.28□□□□□ -0.12
Ccr4P51680 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccr4P51680 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr4P51680 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccr4P51680 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.28□□□□□ -0.12
Ccr4P51680 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.28□□□□□ -0.12
Ccr4P51680 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr4P51680 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr4P51680 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ccr4P51680 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr4P51680 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr4P51680 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr4P51680 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr4P51680 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccr4P51680 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr4P51680 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr4P51680 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr4P51680 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr4P51680 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccr4P51680 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr4P51680 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr4P51680 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr4P51680 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccr4P51680 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccr4P51680 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.27□□□□□ -0.12
Ccr4P51680 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccr4P51680 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Ccr4P51680 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccr4P51680 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccr4P51680 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.27□□□□□ -0.13
Ccr4P51680 Gm12895-201ENSMUST00000122214 226 ntBASIC14.27□□□□□ -0.13
Ccr4P51680 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr4P51680 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccr4P51680 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccr4P51680 Gm7506-201ENSMUST00000207758 815 ntBASIC14.27□□□□□ -0.13
Ccr4P51680 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.27□□□□□ -0.13
Ccr4P51680 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccr4P51680 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr4P51680 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr4P51680 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr4P51680 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr4P51680 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Ccr4P51680 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr4P51680 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr4P51680 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr4P51680 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr4P51680 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr4P51680 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr4P51680 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr4P51680 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr4P51680 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccr4P51680 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr4P51680 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccr4P51680 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.26□□□□□ -0.13
Ccr4P51680 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr4P51680 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ccr4P51680 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.26□□□□□ -0.13
Ccr4P51680 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr4P51680 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.26□□□□□ -0.13
Ccr4P51680 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Ccr4P51680 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ccr4P51680 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr4P51680 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr4P51680 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr4P51680 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr4P51680 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr4P51680 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr4P51680 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr4P51680 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccr4P51680 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr4P51680 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr4P51680 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr4P51680 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccr4P51680 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ccr4P51680 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Ccr4P51680 Gm4459-201ENSMUST00000118750 468 ntBASIC14.25□□□□□ -0.13
Ccr4P51680 Gm12644-201ENSMUST00000119935 606 ntBASIC14.25□□□□□ -0.13
Ccr4P51680 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.25□□□□□ -0.13
Ccr4P51680 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.25□□□□□ -0.13
Ccr4P51680 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ccr4P51680 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccr4P51680 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr4P51680 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms