Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Brca1P48754 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.08■□□□□ 0.33
Brca1P48754 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Brca1P48754 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.08■□□□□ 0.33
Brca1P48754 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17.08■□□□□ 0.33
Brca1P48754 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.08■□□□□ 0.33
Brca1P48754 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Brca1P48754 Gm5479-201ENSMUST00000160578 435 ntBASIC17.08■□□□□ 0.33
Brca1P48754 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.08■□□□□ 0.33
Brca1P48754 Dupd1-202ENSMUST00000224735 548 ntBASIC17.08■□□□□ 0.33
Brca1P48754 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Brca1P48754 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Brca1P48754 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.08■□□□□ 0.32
Brca1P48754 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Brca1P48754 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Brca1P48754 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.07■□□□□ 0.32
Brca1P48754 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Brca1P48754 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Brca1P48754 Mir1938-201ENSMUST00000158746 100 ntBASIC17.07■□□□□ 0.32
Brca1P48754 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.07■□□□□ 0.32
Brca1P48754 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Brca1P48754 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Brca1P48754 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Brca1P48754 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Brca1P48754 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Brca1P48754 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Brca1P48754 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Brca1P48754 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Brca1P48754 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Brca1P48754 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.07■□□□□ 0.32
Brca1P48754 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Brca1P48754 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Brca1P48754 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.07■□□□□ 0.32
Brca1P48754 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brca1P48754 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brca1P48754 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brca1P48754 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brca1P48754 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brca1P48754 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.06■□□□□ 0.32
Brca1P48754 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brca1P48754 Gm37748-201ENSMUST00000194379 1140 ntBASIC17.06■□□□□ 0.32
Brca1P48754 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brca1P48754 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brca1P48754 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brca1P48754 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brca1P48754 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brca1P48754 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.06■□□□□ 0.32
Brca1P48754 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brca1P48754 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brca1P48754 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brca1P48754 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brca1P48754 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Brca1P48754 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brca1P48754 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brca1P48754 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Brca1P48754 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Brca1P48754 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.05■□□□□ 0.32
Brca1P48754 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brca1P48754 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Brca1P48754 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Brca1P48754 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Brca1P48754 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brca1P48754 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brca1P48754 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brca1P48754 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Brca1P48754 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brca1P48754 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brca1P48754 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brca1P48754 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brca1P48754 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.05■□□□□ 0.32
Brca1P48754 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.05■□□□□ 0.32
Brca1P48754 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.05■□□□□ 0.32
Brca1P48754 Gm42612-201ENSMUST00000197986 623 ntBASIC17.05■□□□□ 0.32
Brca1P48754 Gm18018-201ENSMUST00000198273 408 ntBASIC17.05■□□□□ 0.32
Brca1P48754 Gm43170-201ENSMUST00000199827 612 ntBASIC17.05■□□□□ 0.32
Brca1P48754 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.05■□□□□ 0.32
Brca1P48754 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brca1P48754 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Brca1P48754 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brca1P48754 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Brca1P48754 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brca1P48754 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brca1P48754 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brca1P48754 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brca1P48754 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brca1P48754 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brca1P48754 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brca1P48754 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Brca1P48754 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.04■□□□□ 0.32
Brca1P48754 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Brca1P48754 AY702102-202ENSMUST00000194651 1173 ntBASIC17.04■□□□□ 0.32
Brca1P48754 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.04■□□□□ 0.32
Brca1P48754 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Brca1P48754 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.04■□□□□ 0.32
Brca1P48754 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.04■□□□□ 0.32
Brca1P48754 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Brca1P48754 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brca1P48754 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Brca1P48754 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brca1P48754 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms