Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rfx3P48381 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.92□□□□□ -0.18
Rfx3P48381 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.92□□□□□ -0.18
Rfx3P48381 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rfx3P48381 Olfr129-201ENSMUST00000122318 993 ntBASIC13.92□□□□□ -0.18
Rfx3P48381 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.92□□□□□ -0.18
Rfx3P48381 Gm33142-201ENSMUST00000193913 867 ntBASIC13.92□□□□□ -0.18
Rfx3P48381 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.92□□□□□ -0.18
Rfx3P48381 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rfx3P48381 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
Rfx3P48381 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rfx3P48381 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rfx3P48381 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rfx3P48381 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.91□□□□□ -0.18
Rfx3P48381 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rfx3P48381 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Rfx3P48381 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rfx3P48381 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfx3P48381 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rfx3P48381 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rfx3P48381 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Rfx3P48381 Mir3081-201ENSMUST00000175305 84 ntBASIC13.9□□□□□ -0.18
Rfx3P48381 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.9□□□□□ -0.18
Rfx3P48381 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Rfx3P48381 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rfx3P48381 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Rfx3P48381 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfx3P48381 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rfx3P48381 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.89□□□□□ -0.19
Rfx3P48381 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx3P48381 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx3P48381 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx3P48381 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx3P48381 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.89□□□□□ -0.19
Rfx3P48381 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx3P48381 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx3P48381 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rfx3P48381 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx3P48381 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx3P48381 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx3P48381 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx3P48381 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx3P48381 Gm44454-201ENSMUST00000198541 138 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms