Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps4bP46467 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps4bP46467 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps4bP46467 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Vps4bP46467 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps4bP46467 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps4bP46467 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Vps4bP46467 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps4bP46467 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Vps4bP46467 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps4bP46467 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps4bP46467 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Vps4bP46467 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Vps4bP46467 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Vps4bP46467 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps4bP46467 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps4bP46467 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps4bP46467 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Vps4bP46467 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.61■□□□□ 0.09
Vps4bP46467 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.61■□□□□ 0.09
Vps4bP46467 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.61■□□□□ 0.09
Vps4bP46467 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.61■□□□□ 0.09
Vps4bP46467 Gm43514-201ENSMUST00000198852 424 ntBASIC15.61■□□□□ 0.09
Vps4bP46467 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.61■□□□□ 0.09
Vps4bP46467 Mzt1-203ENSMUST00000227948 952 ntBASIC15.61■□□□□ 0.09
Vps4bP46467 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps4bP46467 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps4bP46467 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps4bP46467 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Vps4bP46467 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.61■□□□□ 0.09
Vps4bP46467 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps4bP46467 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps4bP46467 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Vps4bP46467 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps4bP46467 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps4bP46467 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps4bP46467 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Vps4bP46467 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 Gm25745-201ENSMUST00000174945 133 ntBASIC15.6■□□□□ 0.09
Vps4bP46467 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Vps4bP46467 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.6■□□□□ 0.09
Vps4bP46467 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Vps4bP46467 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Vps4bP46467 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.6■□□□□ 0.09
Vps4bP46467 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Vps4bP46467 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps4bP46467 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Vps4bP46467 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 Gm8344-201ENSMUST00000119813 856 ntBASIC15.59■□□□□ 0.09
Vps4bP46467 Gm12497-201ENSMUST00000138778 237 ntBASIC15.59■□□□□ 0.09
Vps4bP46467 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Vps4bP46467 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Vps4bP46467 Gm6443-201ENSMUST00000203599 874 ntBASIC15.59■□□□□ 0.09
Vps4bP46467 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.59■□□□□ 0.09
Vps4bP46467 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Vps4bP46467 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.59■□□□□ 0.09
Vps4bP46467 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.59■□□□□ 0.09
Vps4bP46467 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.59■□□□□ 0.09
Vps4bP46467 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.59■□□□□ 0.09
Vps4bP46467 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Vps4bP46467 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Vps4bP46467 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Vps4bP46467 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps4bP46467 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.59■□□□□ 0.09
Vps4bP46467 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Vps4bP46467 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps4bP46467 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps4bP46467 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps4bP46467 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps4bP46467 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms