Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Tnfsf4P43488 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf4P43488 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Tnfsf4P43488 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf4P43488 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf4P43488 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf4P43488 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf4P43488 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf4P43488 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf4P43488 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf4P43488 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.87□□□□□ -0.03
Tnfsf4P43488 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf4P43488 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf4P43488 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf4P43488 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.86□□□□□ -0.03
Tnfsf4P43488 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 AA414768-201ENSMUST00000121924 1257 ntBASIC14.86□□□□□ -0.03
Tnfsf4P43488 Olfr129-201ENSMUST00000122318 993 ntBASIC14.86□□□□□ -0.03
Tnfsf4P43488 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.86□□□□□ -0.03
Tnfsf4P43488 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.86□□□□□ -0.03
Tnfsf4P43488 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.86□□□□□ -0.03
Tnfsf4P43488 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsf4P43488 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Gm14722-201ENSMUST00000118943 689 ntBASIC14.85□□□□□ -0.03
Tnfsf4P43488 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Gm6659-201ENSMUST00000174752 547 ntBASIC14.85□□□□□ -0.03
Tnfsf4P43488 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfsf4P43488 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Tnfsf4P43488 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfsf4P43488 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfsf4P43488 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Tnfsf4P43488 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms