Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox6P40645 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.48□□□□□ -0.09
Sox6P40645 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sox6P40645 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.48□□□□□ -0.09
Sox6P40645 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Sox6P40645 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox6P40645 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.48□□□□□ -0.09
Sox6P40645 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sox6P40645 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Sox6P40645 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Sox6P40645 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.47□□□□□ -0.09
Sox6P40645 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.47□□□□□ -0.09
Sox6P40645 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Sox6P40645 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.47□□□□□ -0.09
Sox6P40645 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
Sox6P40645 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.47□□□□□ -0.09
Sox6P40645 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.47□□□□□ -0.09
Sox6P40645 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.47□□□□□ -0.09
Sox6P40645 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sox6P40645 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Sox6P40645 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Sox6P40645 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Sox6P40645 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Sox6P40645 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox6P40645 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Sox6P40645 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Sox6P40645 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.46□□□□□ -0.09
Sox6P40645 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.46□□□□□ -0.09
Sox6P40645 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.46□□□□□ -0.09
Sox6P40645 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Sox6P40645 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.46□□□□□ -0.09
Sox6P40645 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.46□□□□□ -0.09
Sox6P40645 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox6P40645 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Sox6P40645 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sox6P40645 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sox6P40645 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sox6P40645 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Sox6P40645 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.45□□□□□ -0.1
Sox6P40645 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms