Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Gm10819-201ENSMUST00000099988 561 ntBASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Tnfrsf1aP25118 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Gm25745-201ENSMUST00000174945 133 ntBASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Tnfrsf1aP25118 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tnfrsf1aP25118 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tnfrsf1aP25118 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tnfrsf1aP25118 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tnfrsf1aP25118 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms