Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Ccl1P10146 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.97□□□□□ -0.49
Ccl1P10146 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Ccl1P10146 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ccl1P10146 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccl1P10146 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
Ccl1P10146 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.97□□□□□ -0.49
Ccl1P10146 Gm29707-201ENSMUST00000196325 491 ntBASIC11.97□□□□□ -0.49
Ccl1P10146 Gm20049-201ENSMUST00000219950 730 ntBASIC11.97□□□□□ -0.49
Ccl1P10146 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC11.97□□□□□ -0.49
Ccl1P10146 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
Ccl1P10146 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ccl1P10146 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ccl1P10146 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccl1P10146 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.97□□□□□ -0.49
Ccl1P10146 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccl1P10146 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl1P10146 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl1P10146 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl1P10146 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl1P10146 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl1P10146 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ccl1P10146 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl1P10146 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl1P10146 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl1P10146 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.96□□□□□ -0.49
Ccl1P10146 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl1P10146 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl1P10146 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
Ccl1P10146 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl1P10146 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl1P10146 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl1P10146 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl1P10146 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl1P10146 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Ccl1P10146 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl1P10146 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl1P10146 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl1P10146 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl1P10146 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl1P10146 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl1P10146 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.96□□□□□ -0.5
Ccl1P10146 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl1P10146 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl1P10146 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl1P10146 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl1P10146 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl1P10146 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl1P10146 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ccl1P10146 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccl1P10146 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccl1P10146 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccl1P10146 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.95□□□□□ -0.5
Ccl1P10146 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.95□□□□□ -0.5
Ccl1P10146 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ccl1P10146 Gm11336-201ENSMUST00000118168 334 ntBASIC11.95□□□□□ -0.5
Ccl1P10146 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.95□□□□□ -0.5
Ccl1P10146 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ccl1P10146 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.95□□□□□ -0.5
Ccl1P10146 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.95□□□□□ -0.5
Ccl1P10146 Gm37179-201ENSMUST00000194862 823 ntBASIC11.95□□□□□ -0.5
Ccl1P10146 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.95□□□□□ -0.5
Ccl1P10146 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.95□□□□□ -0.5
Ccl1P10146 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.95□□□□□ -0.5
Ccl1P10146 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms