Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tp53P02340 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tp53P02340 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Tp53P02340 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tp53P02340 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tp53P02340 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Tp53P02340 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tp53P02340 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tp53P02340 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tp53P02340 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tp53P02340 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tp53P02340 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tp53P02340 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tp53P02340 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tp53P02340 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tp53P02340 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tp53P02340 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tp53P02340 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tp53P02340 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tp53P02340 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.59■□□□□ 0.25
Tp53P02340 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Tp53P02340 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tp53P02340 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.59■□□□□ 0.25
Tp53P02340 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tp53P02340 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tp53P02340 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tp53P02340 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tp53P02340 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tp53P02340 Gm9682-201ENSMUST00000197505 556 ntBASIC16.59■□□□□ 0.25
Tp53P02340 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.59■□□□□ 0.25
Tp53P02340 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.59■□□□□ 0.25
Tp53P02340 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tp53P02340 Gm5867-201ENSMUST00000063197 592 ntBASIC16.59■□□□□ 0.25
Tp53P02340 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.59■□□□□ 0.25
Tp53P02340 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.59■□□□□ 0.25
Tp53P02340 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Tp53P02340 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tp53P02340 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tp53P02340 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tp53P02340 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tp53P02340 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tp53P02340 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tp53P02340 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tp53P02340 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tp53P02340 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Tp53P02340 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tp53P02340 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Tp53P02340 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tp53P02340 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.58■□□□□ 0.24
Tp53P02340 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.58■□□□□ 0.24
Tp53P02340 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Tp53P02340 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tp53P02340 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.58■□□□□ 0.24
Tp53P02340 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tp53P02340 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tp53P02340 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tp53P02340 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tp53P02340 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tp53P02340 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Tp53P02340 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Tp53P02340 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Tp53P02340 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.57■□□□□ 0.24
Tp53P02340 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
Tp53P02340 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
Tp53P02340 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.57■□□□□ 0.24
Tp53P02340 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Tp53P02340 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.57■□□□□ 0.24
Tp53P02340 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Tp53P02340 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.57■□□□□ 0.24
Tp53P02340 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tp53P02340 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tp53P02340 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tp53P02340 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tp53P02340 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tp53P02340 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tp53P02340 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tp53P02340 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tp53P02340 Gm15173-201ENSMUST00000122049 433 ntBASIC16.56■□□□□ 0.24
Tp53P02340 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tp53P02340 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tp53P02340 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.56■□□□□ 0.24
Tp53P02340 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tp53P02340 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.56■□□□□ 0.24
Tp53P02340 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms