Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.8□□□□□ -0.2
Hdac3O88895 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.8□□□□□ -0.2
Hdac3O88895 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.8□□□□□ -0.2
Hdac3O88895 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.8□□□□□ -0.2
Hdac3O88895 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.8□□□□□ -0.2
Hdac3O88895 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.8□□□□□ -0.2
Hdac3O88895 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hdac3O88895 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hdac3O88895 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hdac3O88895 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.8□□□□□ -0.2
Hdac3O88895 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.8□□□□□ -0.2
Hdac3O88895 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.8□□□□□ -0.2
Hdac3O88895 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hdac3O88895 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.8□□□□□ -0.2
Hdac3O88895 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac3O88895 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Hdac3O88895 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.79□□□□□ -0.2
Hdac3O88895 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hdac3O88895 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hdac3O88895 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Hdac3O88895 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.79□□□□□ -0.2
Hdac3O88895 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Hdac3O88895 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hdac3O88895 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Hdac3O88895 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Hdac3O88895 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Hdac3O88895 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hdac3O88895 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
Hdac3O88895 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Hdac3O88895 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.78□□□□□ -0.2
Hdac3O88895 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.78□□□□□ -0.2
Hdac3O88895 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.78□□□□□ -0.2
Hdac3O88895 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.78□□□□□ -0.2
Hdac3O88895 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.78□□□□□ -0.2
Hdac3O88895 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.78□□□□□ -0.2
Hdac3O88895 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.78□□□□□ -0.2
Hdac3O88895 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.78□□□□□ -0.2
Hdac3O88895 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.78□□□□□ -0.2
Hdac3O88895 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hdac3O88895 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Hdac3O88895 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Hdac3O88895 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Hdac3O88895 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
Hdac3O88895 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Hdac3O88895 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms