Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tom1O88746 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tom1O88746 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Tom1O88746 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tom1O88746 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Tom1O88746 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tom1O88746 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Tom1O88746 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Tom1O88746 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tom1O88746 Dupd1-202ENSMUST00000224735 548 ntBASIC20.2■□□□□ 0.82
Tom1O88746 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tom1O88746 Gm5356-201ENSMUST00000093326 615 ntBASIC20.2■□□□□ 0.82
Tom1O88746 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tom1O88746 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC20.2■□□□□ 0.82
Tom1O88746 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tom1O88746 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tom1O88746 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tom1O88746 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC20.2■□□□□ 0.82
Tom1O88746 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tom1O88746 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tom1O88746 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tom1O88746 Prkcz2-201ENSMUST00000206136 1756 ntBASIC20.19■□□□□ 0.82
Tom1O88746 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tom1O88746 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Tom1O88746 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tom1O88746 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tom1O88746 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tom1O88746 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tom1O88746 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC20.19■□□□□ 0.82
Tom1O88746 Gm7619-201ENSMUST00000210649 1282 ntBASIC20.19■□□□□ 0.82
Tom1O88746 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC20.19■□□□□ 0.82
Tom1O88746 Gm13337-201ENSMUST00000119183 1594 ntBASIC20.19■□□□□ 0.82
Tom1O88746 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tom1O88746 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Tom1O88746 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tom1O88746 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tom1O88746 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
Tom1O88746 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Tom1O88746 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC20.18■□□□□ 0.82
Tom1O88746 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Tom1O88746 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC20.18■□□□□ 0.82
Tom1O88746 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Tom1O88746 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tom1O88746 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tom1O88746 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.18■□□□□ 0.82
Tom1O88746 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tom1O88746 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tom1O88746 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tom1O88746 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Tom1O88746 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tom1O88746 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC20.17■□□□□ 0.82
Tom1O88746 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC20.17■□□□□ 0.82
Tom1O88746 Gm9728-201ENSMUST00000200197 1055 ntBASIC20.17■□□□□ 0.82
Tom1O88746 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tom1O88746 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Tom1O88746 Gm6756-201ENSMUST00000180647 1620 ntBASIC20.16■□□□□ 0.82
Tom1O88746 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tom1O88746 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tom1O88746 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tom1O88746 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tom1O88746 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tom1O88746 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tom1O88746 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tom1O88746 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tom1O88746 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tom1O88746 Gm27839-201ENSMUST00000184242 106 ntBASIC20.16■□□□□ 0.82
Tom1O88746 Gm45784-201ENSMUST00000188360 142 ntBASIC20.16■□□□□ 0.82
Tom1O88746 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC20.16■□□□□ 0.82
Tom1O88746 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC20.16■□□□□ 0.82
Tom1O88746 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tom1O88746 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tom1O88746 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tom1O88746 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tom1O88746 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tom1O88746 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tom1O88746 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tom1O88746 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Tom1O88746 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tom1O88746 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tom1O88746 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tom1O88746 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tom1O88746 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tom1O88746 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Tom1O88746 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms