Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gm25948-201ENSMUST00000175334 112 ntBASIC18.72■□□□□ 0.59
Cops6O88545 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cops6O88545 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cops6O88545 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cops6O88545 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cops6O88545 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cops6O88545 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cops6O88545 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
Cops6O88545 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cops6O88545 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops6O88545 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops6O88545 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cops6O88545 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops6O88545 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops6O88545 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops6O88545 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops6O88545 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cops6O88545 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.71■□□□□ 0.59
Cops6O88545 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.71■□□□□ 0.59
Cops6O88545 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.71■□□□□ 0.59
Cops6O88545 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops6O88545 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops6O88545 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cops6O88545 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops6O88545 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cops6O88545 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops6O88545 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cops6O88545 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops6O88545 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops6O88545 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops6O88545 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops6O88545 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cops6O88545 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Cops6O88545 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cops6O88545 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Cops6O88545 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 Mir449b-201ENSMUST00000104833 80 ntBASIC18.7■□□□□ 0.58
Cops6O88545 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cops6O88545 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Cops6O88545 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cops6O88545 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.7■□□□□ 0.58
Cops6O88545 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Cops6O88545 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops6O88545 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cops6O88545 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Cops6O88545 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.69■□□□□ 0.58
Cops6O88545 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops6O88545 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cops6O88545 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.68■□□□□ 0.58
Cops6O88545 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cops6O88545 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cops6O88545 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cops6O88545 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cops6O88545 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cops6O88545 Gm6973-201ENSMUST00000117080 721 ntBASIC18.68■□□□□ 0.58
Cops6O88545 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Cops6O88545 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.68■□□□□ 0.58
Cops6O88545 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cops6O88545 Gm16026-204ENSMUST00000162652 683 ntBASIC18.68■□□□□ 0.58
Cops6O88545 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.68■□□□□ 0.58
Cops6O88545 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cops6O88545 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cops6O88545 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cops6O88545 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cops6O88545 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cops6O88545 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cops6O88545 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.68■□□□□ 0.58
Cops6O88545 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms