Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.32■□□□□ 0.04
Pknox1O70477 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Pknox1O70477 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pknox1O70477 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pknox1O70477 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pknox1O70477 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pknox1O70477 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pknox1O70477 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pknox1O70477 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pknox1O70477 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pknox1O70477 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pknox1O70477 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pknox1O70477 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Pknox1O70477 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.31■□□□□ 0.04
Pknox1O70477 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.31■□□□□ 0.04
Pknox1O70477 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Pknox1O70477 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Pknox1O70477 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Pknox1O70477 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.31■□□□□ 0.04
Pknox1O70477 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.31■□□□□ 0.04
Pknox1O70477 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pknox1O70477 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.31■□□□□ 0.04
Pknox1O70477 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pknox1O70477 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pknox1O70477 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pknox1O70477 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Pknox1O70477 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pknox1O70477 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 Gm15165-201ENSMUST00000118140 502 ntBASIC15.3■□□□□ 0.04
Pknox1O70477 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pknox1O70477 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.3■□□□□ 0.04
Pknox1O70477 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.3■□□□□ 0.04
Pknox1O70477 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pknox1O70477 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Pknox1O70477 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Pknox1O70477 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pknox1O70477 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pknox1O70477 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.29■□□□□ 0.04
Pknox1O70477 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Pknox1O70477 Gm14722-201ENSMUST00000118943 689 ntBASIC15.29■□□□□ 0.04
Pknox1O70477 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.29■□□□□ 0.04
Pknox1O70477 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.29■□□□□ 0.04
Pknox1O70477 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Pknox1O70477 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.29■□□□□ 0.04
Pknox1O70477 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Pknox1O70477 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pknox1O70477 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pknox1O70477 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms