Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim3O70209 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim3O70209 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim3O70209 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.96□□□□□ -0.17
Pdlim3O70209 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pdlim3O70209 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim3O70209 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pdlim3O70209 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim3O70209 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.96□□□□□ -0.17
Pdlim3O70209 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.96□□□□□ -0.17
Pdlim3O70209 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim3O70209 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pdlim3O70209 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Pdlim3O70209 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim3O70209 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim3O70209 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdlim3O70209 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdlim3O70209 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdlim3O70209 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pdlim3O70209 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdlim3O70209 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdlim3O70209 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Pdlim3O70209 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdlim3O70209 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdlim3O70209 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.95□□□□□ -0.18
Pdlim3O70209 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pdlim3O70209 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pdlim3O70209 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pdlim3O70209 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.95□□□□□ -0.18
Pdlim3O70209 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.95□□□□□ -0.18
Pdlim3O70209 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.95□□□□□ -0.18
Pdlim3O70209 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.95□□□□□ -0.18
Pdlim3O70209 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pdlim3O70209 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Pdlim3O70209 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Pdlim3O70209 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim3O70209 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pdlim3O70209 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim3O70209 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim3O70209 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pdlim3O70209 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim3O70209 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim3O70209 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pdlim3O70209 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim3O70209 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.94□□□□□ -0.18
Pdlim3O70209 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim3O70209 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim3O70209 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.94□□□□□ -0.18
Pdlim3O70209 Gm25406-201ENSMUST00000157599 105 ntBASIC13.94□□□□□ -0.18
Pdlim3O70209 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.94□□□□□ -0.18
Pdlim3O70209 Gm6623-201ENSMUST00000173570 544 ntBASIC13.94□□□□□ -0.18
Pdlim3O70209 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.94□□□□□ -0.18
Pdlim3O70209 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim3O70209 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim3O70209 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim3O70209 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim3O70209 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim3O70209 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.94□□□□□ -0.18
Pdlim3O70209 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim3O70209 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim3O70209 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim3O70209 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pdlim3O70209 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pdlim3O70209 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Pdlim3O70209 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Pdlim3O70209 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
Pdlim3O70209 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms