Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Itgb3O54890 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Itgb3O54890 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Itgb3O54890 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Itgb3O54890 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Itgb3O54890 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Itgb3O54890 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.29■□□□□ 0.2
Itgb3O54890 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Itgb3O54890 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Itgb3O54890 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Itgb3O54890 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Itgb3O54890 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Itgb3O54890 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Itgb3O54890 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.28■□□□□ 0.2
Itgb3O54890 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Itgb3O54890 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Itgb3O54890 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.28■□□□□ 0.2
Itgb3O54890 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.28■□□□□ 0.2
Itgb3O54890 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Itgb3O54890 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Itgb3O54890 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Itgb3O54890 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.28■□□□□ 0.2
Itgb3O54890 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Itgb3O54890 Gm18246-201ENSMUST00000221023 728 ntBASIC16.28■□□□□ 0.2
Itgb3O54890 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Itgb3O54890 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Itgb3O54890 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Itgb3O54890 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Itgb3O54890 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Itgb3O54890 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Itgb3O54890 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Itgb3O54890 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.28■□□□□ 0.2
Itgb3O54890 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Itgb3O54890 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Itgb3O54890 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Itgb3O54890 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Itgb3O54890 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Itgb3O54890 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Itgb3O54890 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Itgb3O54890 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.27■□□□□ 0.2
Itgb3O54890 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.27■□□□□ 0.2
Itgb3O54890 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.27■□□□□ 0.2
Itgb3O54890 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Itgb3O54890 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Itgb3O54890 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.27■□□□□ 0.2
Itgb3O54890 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.27■□□□□ 0.2
Itgb3O54890 Mir3113-201ENSMUST00000175478 76 ntBASIC16.27■□□□□ 0.2
Itgb3O54890 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.27■□□□□ 0.2
Itgb3O54890 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.27■□□□□ 0.2
Itgb3O54890 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.27■□□□□ 0.2
Itgb3O54890 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.27■□□□□ 0.2
Itgb3O54890 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Itgb3O54890 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Itgb3O54890 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Itgb3O54890 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Itgb3O54890 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Itgb3O54890 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Itgb3O54890 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.27■□□□□ 0.19
Itgb3O54890 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Itgb3O54890 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Itgb3O54890 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Itgb3O54890 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Itgb3O54890 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Gm37935-201ENSMUST00000192012 982 ntBASIC16.26■□□□□ 0.19
Itgb3O54890 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Itgb3O54890 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Itgb3O54890 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Itgb3O54890 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Itgb3O54890 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Itgb3O54890 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.25■□□□□ 0.19
Itgb3O54890 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Itgb3O54890 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Itgb3O54890 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.25■□□□□ 0.19
Itgb3O54890 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Itgb3O54890 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Itgb3O54890 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.25■□□□□ 0.19
Itgb3O54890 Gm4995-201ENSMUST00000117247 432 ntBASIC16.25■□□□□ 0.19
Itgb3O54890 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.25■□□□□ 0.19
Itgb3O54890 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.25■□□□□ 0.19
Itgb3O54890 Mir8117-201ENSMUST00000184773 107 ntBASIC16.25■□□□□ 0.19
Itgb3O54890 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms