Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ccr6O54689 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccr6O54689 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccr6O54689 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccr6O54689 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccr6O54689 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccr6O54689 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccr6O54689 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccr6O54689 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ccr6O54689 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccr6O54689 Gm12008-201ENSMUST00000117791 755 ntBASIC12.93□□□□□ -0.34
Ccr6O54689 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccr6O54689 Gm27463-201ENSMUST00000183569 57 ntBASIC12.93□□□□□ -0.34
Ccr6O54689 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.93□□□□□ -0.34
Ccr6O54689 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.93□□□□□ -0.34
Ccr6O54689 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccr6O54689 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccr6O54689 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccr6O54689 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ccr6O54689 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Ccr6O54689 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccr6O54689 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccr6O54689 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccr6O54689 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccr6O54689 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccr6O54689 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccr6O54689 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccr6O54689 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccr6O54689 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccr6O54689 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ccr6O54689 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccr6O54689 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccr6O54689 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccr6O54689 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccr6O54689 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ccr6O54689 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccr6O54689 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.92□□□□□ -0.34
Ccr6O54689 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.92□□□□□ -0.34
Ccr6O54689 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccr6O54689 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccr6O54689 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccr6O54689 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccr6O54689 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccr6O54689 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.91□□□□□ -0.34
Ccr6O54689 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ccr6O54689 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.91□□□□□ -0.34
Ccr6O54689 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.91□□□□□ -0.34
Ccr6O54689 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.91□□□□□ -0.34
Ccr6O54689 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ccr6O54689 Gm44430-201ENSMUST00000203376 995 ntBASIC12.91□□□□□ -0.34
Ccr6O54689 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ccr6O54689 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms