Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Npc1O35604 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.02■□□□□ -0
Npc1O35604 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Npc1O35604 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Npc1O35604 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Npc1O35604 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Npc1O35604 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Npc1O35604 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Npc1O35604 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Npc1O35604 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Npc1O35604 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Npc1O35604 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Npc1O35604 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Npc1O35604 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Npc1O35604 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.02■□□□□ -0
Npc1O35604 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.02■□□□□ -0
Npc1O35604 Gm13036-201ENSMUST00000117799 748 ntBASIC15.02■□□□□ -0
Npc1O35604 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.02■□□□□ -0
Npc1O35604 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.02■□□□□ -0
Npc1O35604 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.02■□□□□ -0
Npc1O35604 Gm37153-201ENSMUST00000193637 231 ntBASIC15.02■□□□□ -0
Npc1O35604 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.02■□□□□ -0
Npc1O35604 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Npc1O35604 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.02■□□□□ -0
Npc1O35604 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Npc1O35604 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.02□□□□□ -0.01
Npc1O35604 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Npc1O35604 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Npc1O35604 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Npc1O35604 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Npc1O35604 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.02□□□□□ -0.01
Npc1O35604 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Npc1O35604 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Npc1O35604 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Npc1O35604 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Npc1O35604 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.02□□□□□ -0.01
Npc1O35604 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.01□□□□□ -0.01
Npc1O35604 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Npc1O35604 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.01□□□□□ -0.01
Npc1O35604 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Npc1O35604 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.01□□□□□ -0.01
Npc1O35604 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Npc1O35604 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.01□□□□□ -0.01
Npc1O35604 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.01□□□□□ -0.01
Npc1O35604 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Gm15590-201ENSMUST00000078419 552 ntBASIC15.01□□□□□ -0.01
Npc1O35604 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Npc1O35604 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.01□□□□□ -0.01
Npc1O35604 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Npc1O35604 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15□□□□□ -0.01
Npc1O35604 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Npc1O35604 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Npc1O35604 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15□□□□□ -0.01
Npc1O35604 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15□□□□□ -0.01
Npc1O35604 Psmb5-202ENSMUST00000227257 622 ntBASIC15□□□□□ -0.01
Npc1O35604 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15□□□□□ -0.01
Npc1O35604 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15□□□□□ -0.01
Npc1O35604 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Npc1O35604 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Npc1O35604 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms