Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.67■□□□□ 0.26
Clk2O35491 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk2O35491 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk2O35491 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk2O35491 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk2O35491 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk2O35491 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk2O35491 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk2O35491 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Clk2O35491 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Clk2O35491 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.66■□□□□ 0.26
Clk2O35491 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.66■□□□□ 0.26
Clk2O35491 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.66■□□□□ 0.26
Clk2O35491 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Gm9385-201ENSMUST00000117563 472 ntBASIC16.66■□□□□ 0.26
Clk2O35491 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.66■□□□□ 0.26
Clk2O35491 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.66■□□□□ 0.26
Clk2O35491 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.66■□□□□ 0.26
Clk2O35491 Gm20553-201ENSMUST00000204205 844 ntBASIC16.66■□□□□ 0.26
Clk2O35491 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Clk2O35491 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Clk2O35491 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.66■□□□□ 0.26
Clk2O35491 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Clk2O35491 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Clk2O35491 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Clk2O35491 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.66■□□□□ 0.26
Clk2O35491 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clk2O35491 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.65■□□□□ 0.26
Clk2O35491 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Clk2O35491 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.65■□□□□ 0.26
Clk2O35491 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.65■□□□□ 0.26
Clk2O35491 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Clk2O35491 Rpph1-201ENSMUST00000175096 319 ntBASIC16.65■□□□□ 0.26
Clk2O35491 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.65■□□□□ 0.26
Clk2O35491 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Clk2O35491 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk2O35491 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.64■□□□□ 0.26
Clk2O35491 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clk2O35491 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk2O35491 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk2O35491 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk2O35491 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clk2O35491 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk2O35491 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk2O35491 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk2O35491 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Clk2O35491 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Clk2O35491 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.64■□□□□ 0.25
Clk2O35491 Gm26308-201ENSMUST00000157768 69 ntBASIC16.64■□□□□ 0.25
Clk2O35491 Gm27494-201ENSMUST00000184735 189 ntBASIC16.64■□□□□ 0.25
Clk2O35491 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.64■□□□□ 0.25
Clk2O35491 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.64■□□□□ 0.25
Clk2O35491 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk2O35491 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.64■□□□□ 0.25
Clk2O35491 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk2O35491 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk2O35491 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Clk2O35491 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk2O35491 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk2O35491 Prob1-201ENSMUST00000097619 3021 ntBASIC16.64■□□□□ 0.25
Clk2O35491 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk2O35491 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms