Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.26□□□□□ -0.13
Capn1O35350 Gm14140-201ENSMUST00000119999 995 ntBASIC14.26□□□□□ -0.13
Capn1O35350 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.26□□□□□ -0.13
Capn1O35350 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.26□□□□□ -0.13
Capn1O35350 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 Gm18622-201ENSMUST00000219361 595 ntBASIC14.26□□□□□ -0.13
Capn1O35350 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.26□□□□□ -0.13
Capn1O35350 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.26□□□□□ -0.13
Capn1O35350 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Capn1O35350 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Capn1O35350 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Capn1O35350 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.26□□□□□ -0.13
Capn1O35350 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Capn1O35350 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Capn1O35350 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Capn1O35350 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.25□□□□□ -0.13
Capn1O35350 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Capn1O35350 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.25□□□□□ -0.13
Capn1O35350 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.25□□□□□ -0.13
Capn1O35350 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.25□□□□□ -0.13
Capn1O35350 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.25□□□□□ -0.13
Capn1O35350 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Capn1O35350 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.25□□□□□ -0.13
Capn1O35350 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.25□□□□□ -0.13
Capn1O35350 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.25□□□□□ -0.13
Capn1O35350 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Capn1O35350 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Capn1O35350 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Capn1O35350 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.24□□□□□ -0.13
Capn1O35350 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.24□□□□□ -0.13
Capn1O35350 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.24□□□□□ -0.13
Capn1O35350 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Capn1O35350 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Capn1O35350 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Capn1O35350 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.24□□□□□ -0.13
Capn1O35350 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capn1O35350 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms