Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna9G3X8Z7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Chrna9G3X8Z7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna9G3X8Z7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna9G3X8Z7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna9G3X8Z7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna9G3X8Z7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna9G3X8Z7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna9G3X8Z7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna9G3X8Z7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna9G3X8Z7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna9G3X8Z7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna9G3X8Z7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Chrna9G3X8Z7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Gm4535-201ENSMUST00000182274 558 ntBASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Gm34391-201ENSMUST00000203706 907 ntBASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Gm10355-201ENSMUST00000097146 517 ntBASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna9G3X8Z7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms