Protein–RNA interactions for Protein: E9QA15

Cald1, Caldesmon 1, mousemouse

Known RBP Predictions only

Length 768 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cald1E9QA15 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cald1E9QA15 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Gm27397-201ENSMUST00000184997 107 ntBASIC20.3■□□□□ 0.84
Cald1E9QA15 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cald1E9QA15 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cald1E9QA15 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Cald1E9QA15 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cald1E9QA15 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cald1E9QA15 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cald1E9QA15 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cald1E9QA15 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cald1E9QA15 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC20.29■□□□□ 0.84
Cald1E9QA15 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cald1E9QA15 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cald1E9QA15 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cald1E9QA15 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.29■□□□□ 0.84
Cald1E9QA15 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cald1E9QA15 Gm23935-201ENSMUST00000102303 57 ntBASIC20.29■□□□□ 0.84
Cald1E9QA15 Gm24270-201ENSMUST00000102326 57 ntBASIC20.29■□□□□ 0.84
Cald1E9QA15 Gm16198-201ENSMUST00000118766 670 ntBASIC20.29■□□□□ 0.84
Cald1E9QA15 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cald1E9QA15 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC20.29■□□□□ 0.84
Cald1E9QA15 Gm24245-201ENSMUST00000157318 57 ntBASIC20.29■□□□□ 0.84
Cald1E9QA15 Gm2272-201ENSMUST00000194903 582 ntBASIC20.29■□□□□ 0.84
Cald1E9QA15 Gm43575-201ENSMUST00000196420 516 ntBASIC20.29■□□□□ 0.84
Cald1E9QA15 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cald1E9QA15 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.29■□□□□ 0.84
Cald1E9QA15 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cald1E9QA15 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cald1E9QA15 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cald1E9QA15 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cald1E9QA15 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cald1E9QA15 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cald1E9QA15 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cald1E9QA15 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cald1E9QA15 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cald1E9QA15 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cald1E9QA15 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cald1E9QA15 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cald1E9QA15 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cald1E9QA15 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.28■□□□□ 0.84
Cald1E9QA15 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cald1E9QA15 Gm27301-201ENSMUST00000184012 127 ntBASIC20.28■□□□□ 0.84
Cald1E9QA15 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cald1E9QA15 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cald1E9QA15 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cald1E9QA15 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.28■□□□□ 0.84
Cald1E9QA15 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cald1E9QA15 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cald1E9QA15 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cald1E9QA15 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
Cald1E9QA15 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cald1E9QA15 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cald1E9QA15 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cald1E9QA15 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cald1E9QA15 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC20.27■□□□□ 0.84
Cald1E9QA15 Gm15427-201ENSMUST00000117288 531 ntBASIC20.27■□□□□ 0.84
Cald1E9QA15 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC20.27■□□□□ 0.84
Cald1E9QA15 Gm14822-201ENSMUST00000122247 291 ntBASIC20.27■□□□□ 0.84
Cald1E9QA15 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC20.27■□□□□ 0.84
Cald1E9QA15 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cald1E9QA15 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC20.27■□□□□ 0.84
Cald1E9QA15 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cald1E9QA15 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC20.27■□□□□ 0.84
Cald1E9QA15 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cald1E9QA15 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cald1E9QA15 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cald1E9QA15 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cald1E9QA15 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cald1E9QA15 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cald1E9QA15 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cald1E9QA15 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cald1E9QA15 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cald1E9QA15 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC20.26■□□□□ 0.83
Cald1E9QA15 Gm6736-201ENSMUST00000166583 948 ntBASIC20.26■□□□□ 0.83
Cald1E9QA15 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cald1E9QA15 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cald1E9QA15 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cald1E9QA15 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC20.26■□□□□ 0.83
Cald1E9QA15 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cald1E9QA15 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC20.26■□□□□ 0.83
Cald1E9QA15 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC20.26■□□□□ 0.83
Cald1E9QA15 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms