Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn7aB1AYL1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn7aB1AYL1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Scn7aB1AYL1 Gm6222-201ENSMUST00000120787 396 ntBASIC19.63■□□□□ 0.73
Scn7aB1AYL1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scn7aB1AYL1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC19.63■□□□□ 0.73
Scn7aB1AYL1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scn7aB1AYL1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scn7aB1AYL1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scn7aB1AYL1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Gm45098-201ENSMUST00000207179 657 ntBASIC19.62■□□□□ 0.73
Scn7aB1AYL1 AC149588.3-201ENSMUST00000227515 150 ntBASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn7aB1AYL1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 App-207ENSMUST00000227737 2827 ntBASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Asic1-205ENSMUST00000228185 1818 ntBASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn7aB1AYL1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Gm44855-201ENSMUST00000205725 362 ntBASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Tcf21-202ENSMUST00000218002 1788 ntBASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scn7aB1AYL1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Gm6473-201ENSMUST00000188572 1210 ntBASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Gm5186-201ENSMUST00000218781 920 ntBASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Gm3365-201ENSMUST00000216296 1480 ntBASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn7aB1AYL1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn7aB1AYL1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Gm5566-201ENSMUST00000116118 459 ntBASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC19.59■□□□□ 0.73
Scn7aB1AYL1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn7aB1AYL1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms