Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Col6a4A2AX52 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.96□□□□□ -0.33
Col6a4A2AX52 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Col6a4A2AX52 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a4A2AX52 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Col6a4A2AX52 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.96□□□□□ -0.34
Col6a4A2AX52 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a4A2AX52 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a4A2AX52 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a4A2AX52 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a4A2AX52 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.96□□□□□ -0.34
Col6a4A2AX52 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a4A2AX52 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a4A2AX52 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a4A2AX52 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a4A2AX52 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm29541-201ENSMUST00000191351 678 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.95□□□□□ -0.34
Col6a4A2AX52 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm22065-201ENSMUST00000103753 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm22066-201ENSMUST00000103761 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm24932-201ENSMUST00000103763 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm24115-201ENSMUST00000103799 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm22190-201ENSMUST00000103827 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm22191-201ENSMUST00000103831 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm24721-201ENSMUST00000103849 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm28018-201ENSMUST00000103869 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm26399-201ENSMUST00000103937 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm25349-201ENSMUST00000177728 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm23616-201ENSMUST00000177797 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm25871-201ENSMUST00000177816 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm24752-201ENSMUST00000178240 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm24496-201ENSMUST00000178287 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm25649-201ENSMUST00000178476 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm25548-201ENSMUST00000178681 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm23147-201ENSMUST00000178841 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm26095-201ENSMUST00000179270 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm22171-201ENSMUST00000179283 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm23936-201ENSMUST00000179354 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm22619-201ENSMUST00000179516 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm25255-201ENSMUST00000179579 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm24755-201ENSMUST00000179691 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm26506-201ENSMUST00000179692 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm25086-201ENSMUST00000179931 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm23243-201ENSMUST00000180047 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm24659-201ENSMUST00000180212 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm24169-201ENSMUST00000180244 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm23689-201ENSMUST00000180354 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm27359-201ENSMUST00000184153 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm27785-201ENSMUST00000184268 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm27466-201ENSMUST00000184396 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Gm27703-201ENSMUST00000184836 110 ntBASIC12.95□□□□□ -0.34
Col6a4A2AX52 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms