Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Gm5864-201ENSMUST00000202263 970 ntBASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7-5A0A0G2JFX6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7-5A0A0G2JFX6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Gm7862-201ENSMUST00000121461 292 ntBASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Gm6296-201ENSMUST00000222599 943 ntBASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7-5A0A0G2JFX6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms