Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Gm6089-201ENSMUST00000197666 938 ntBASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-4A0A075B6B4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Gm7862-201ENSMUST00000121461 292 ntBASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Gm18195-201ENSMUST00000207604 706 ntBASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-4A0A075B6B4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Gm13884-201ENSMUST00000118103 829 ntBASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Gm27646-201ENSMUST00000183989 110 ntBASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Gm27741-201ENSMUST00000185060 237 ntBASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms