Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trbv4A0A075B5I2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv4A0A075B5I2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv4A0A075B5I2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Gm25990-201ENSMUST00000102440 86 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms