Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.9□□□□□ -0.18
H2afb3S4R1G7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.9□□□□□ -0.19
H2afb3S4R1G7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
H2afb3S4R1G7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Gm15794-201ENSMUST00000120182 631 ntBASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb3S4R1G7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Gm6659-201ENSMUST00000174752 547 ntBASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb3S4R1G7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms