Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Gm25144-201ENSMUST00000179561 110 ntBASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Gm25352-201ENSMUST00000179815 110 ntBASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Hdac6Q9Z2V5 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Gm13233-201ENSMUST00000118760 1443 ntBASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Gm13244-201ENSMUST00000118855 1446 ntBASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Gm27920-201ENSMUST00000183953 96 ntBASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac6Q9Z2V5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac6Q9Z2V5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac6Q9Z2V5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac6Q9Z2V5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac6Q9Z2V5 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hdac6Q9Z2V5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC19.19■□□□□ 0.66
Hdac6Q9Z2V5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac6Q9Z2V5 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac6Q9Z2V5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac6Q9Z2V5 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac6Q9Z2V5 Gm18766-201ENSMUST00000189811 808 ntBASIC19.19■□□□□ 0.66
Hdac6Q9Z2V5 Gm8597-201ENSMUST00000191525 1109 ntBASIC19.19■□□□□ 0.66
Hdac6Q9Z2V5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac6Q9Z2V5 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac6Q9Z2V5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac6Q9Z2V5 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac6Q9Z2V5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Hdac6Q9Z2V5 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac6Q9Z2V5 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Hdac6Q9Z2V5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac6Q9Z2V5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac6Q9Z2V5 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Hdac6Q9Z2V5 Gm13823-201ENSMUST00000119930 345 ntBASIC19.18■□□□□ 0.66
Hdac6Q9Z2V5 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac6Q9Z2V5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac6Q9Z2V5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.18■□□□□ 0.66
Hdac6Q9Z2V5 Gm9063-201ENSMUST00000223299 582 ntBASIC19.18■□□□□ 0.66
Hdac6Q9Z2V5 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC19.18■□□□□ 0.66
Hdac6Q9Z2V5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms