Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC18.35■□□□□ 0.53
Lgr5Q9Z1P4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lgr5Q9Z1P4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.35■□□□□ 0.53
Lgr5Q9Z1P4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.35■□□□□ 0.53
Lgr5Q9Z1P4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lgr5Q9Z1P4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lgr5Q9Z1P4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.35■□□□□ 0.53
Lgr5Q9Z1P4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lgr5Q9Z1P4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lgr5Q9Z1P4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lgr5Q9Z1P4 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lgr5Q9Z1P4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Lgr5Q9Z1P4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lgr5Q9Z1P4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.33■□□□□ 0.53
Lgr5Q9Z1P4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Lgr5Q9Z1P4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Lgr5Q9Z1P4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Lgr5Q9Z1P4 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Lgr5Q9Z1P4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lgr5Q9Z1P4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Lgr5Q9Z1P4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.33■□□□□ 0.53
Lgr5Q9Z1P4 Gm12428-201ENSMUST00000119844 727 ntBASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Gm27306-201ENSMUST00000183970 107 ntBASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lgr5Q9Z1P4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lgr5Q9Z1P4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lgr5Q9Z1P4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lgr5Q9Z1P4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Lgr5Q9Z1P4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lgr5Q9Z1P4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lgr5Q9Z1P4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lgr5Q9Z1P4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lgr5Q9Z1P4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lgr5Q9Z1P4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.31■□□□□ 0.52
Lgr5Q9Z1P4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lgr5Q9Z1P4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lgr5Q9Z1P4 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.3■□□□□ 0.52
Lgr5Q9Z1P4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms