Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.52□□□□□ -0.09
Trim3Q9R1R2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.52□□□□□ -0.09
Trim3Q9R1R2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim3Q9R1R2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trim3Q9R1R2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim3Q9R1R2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim3Q9R1R2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim3Q9R1R2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim3Q9R1R2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim3Q9R1R2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim3Q9R1R2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim3Q9R1R2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim3Q9R1R2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim3Q9R1R2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim3Q9R1R2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trim3Q9R1R2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Trim3Q9R1R2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Mir6404-201ENSMUST00000183699 94 ntBASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim3Q9R1R2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Mir8098-201ENSMUST00000184011 137 ntBASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Gm28659-201ENSMUST00000188013 759 ntBASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Gm7461-201ENSMUST00000058918 827 ntBASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim3Q9R1R2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim3Q9R1R2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Gm25406-201ENSMUST00000157599 105 ntBASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Gm5864-201ENSMUST00000202263 970 ntBASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.49□□□□□ -0.09
Trim3Q9R1R2 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim3Q9R1R2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim3Q9R1R2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms