Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Cdh17Q9R100 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cdh17Q9R100 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cdh17Q9R100 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cdh17Q9R100 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.04■□□□□ -0
Cdh17Q9R100 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cdh17Q9R100 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cdh17Q9R100 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh17Q9R100 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.03■□□□□ -0
Cdh17Q9R100 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cdh17Q9R100 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Cdh17Q9R100 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cdh17Q9R100 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.03■□□□□ -0
Cdh17Q9R100 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.03■□□□□ -0
Cdh17Q9R100 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.03■□□□□ -0
Cdh17Q9R100 Gm7506-201ENSMUST00000207758 815 ntBASIC15.03■□□□□ -0
Cdh17Q9R100 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh17Q9R100 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cdh17Q9R100 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdh17Q9R100 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh17Q9R100 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdh17Q9R100 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cdh17Q9R100 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh17Q9R100 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdh17Q9R100 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh17Q9R100 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh17Q9R100 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.02■□□□□ -0
Cdh17Q9R100 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdh17Q9R100 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Cdh17Q9R100 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh17Q9R100 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh17Q9R100 Gm15372-201ENSMUST00000120729 834 ntBASIC15.02■□□□□ -0
Cdh17Q9R100 Gm7284-201ENSMUST00000131667 944 ntBASIC15.02■□□□□ -0
Cdh17Q9R100 Gm27357-201ENSMUST00000183754 135 ntBASIC15.02■□□□□ -0
Cdh17Q9R100 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.02■□□□□ -0
Cdh17Q9R100 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.02■□□□□ -0
Cdh17Q9R100 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdh17Q9R100 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.02■□□□□ -0
Cdh17Q9R100 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh17Q9R100 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh17Q9R100 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.02■□□□□ -0
Cdh17Q9R100 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh17Q9R100 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh17Q9R100 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh17Q9R100 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh17Q9R100 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.02□□□□□ -0.01
Cdh17Q9R100 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Cdh17Q9R100 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh17Q9R100 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh17Q9R100 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh17Q9R100 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh17Q9R100 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh17Q9R100 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh17Q9R100 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh17Q9R100 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh17Q9R100 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh17Q9R100 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cdh17Q9R100 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cdh17Q9R100 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh17Q9R100 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh17Q9R100 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh17Q9R100 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh17Q9R100 Grk6-207ENSMUST00000225925 2769 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms