Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Gm18622-201ENSMUST00000219361 595 ntBASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Gm27397-201ENSMUST00000184997 107 ntBASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Gm15358-201ENSMUST00000119249 520 ntBASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.42■□□□□ 0.06
Shroom3Q9QXN0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom3Q9QXN0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Gm9682-201ENSMUST00000197505 556 ntBASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms