Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Gm25406-201ENSMUST00000157599 105 ntBASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Sec61a2Q9JLR1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sec61a2Q9JLR1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.9□□□□□ -0.19
Sec61a2Q9JLR1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sec61a2Q9JLR1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Sec61a2Q9JLR1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a2Q9JLR1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Gm15165-201ENSMUST00000118140 502 ntBASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sec61a2Q9JLR1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a2Q9JLR1 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms