Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp1bQ9EPL6 Efs-202ENSMUST00000227037 2540 ntBASIC13.62□□□□□ -0.23
Mmp1bQ9EPL6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.62□□□□□ -0.23
Mmp1bQ9EPL6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp1bQ9EPL6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Mmp1bQ9EPL6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp1bQ9EPL6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp1bQ9EPL6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp1bQ9EPL6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp1bQ9EPL6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.62□□□□□ -0.23
Mmp1bQ9EPL6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp1bQ9EPL6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Mmp1bQ9EPL6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp1bQ9EPL6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Mmp1bQ9EPL6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp1bQ9EPL6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.62□□□□□ -0.23
Mmp1bQ9EPL6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp1bQ9EPL6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Gm6257-201ENSMUST00000163864 910 ntBASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Mmp1bQ9EPL6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms