Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
U2af1Q9D883 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
U2af1Q9D883 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 Gm13597-201ENSMUST00000121239 375 ntBASIC20.24■□□□□ 0.83
U2af1Q9D883 Gm11594-201ENSMUST00000122313 162 ntBASIC20.24■□□□□ 0.83
U2af1Q9D883 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 Gm10499-201ENSMUST00000174094 934 ntBASIC20.24■□□□□ 0.83
U2af1Q9D883 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC20.24■□□□□ 0.83
U2af1Q9D883 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 Gm5366-201ENSMUST00000215494 1338 ntBASIC20.24■□□□□ 0.83
U2af1Q9D883 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.24■□□□□ 0.83
U2af1Q9D883 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
U2af1Q9D883 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2af1Q9D883 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2af1Q9D883 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2af1Q9D883 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
U2af1Q9D883 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2af1Q9D883 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
U2af1Q9D883 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
U2af1Q9D883 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2af1Q9D883 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.23■□□□□ 0.83
U2af1Q9D883 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
U2af1Q9D883 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2af1Q9D883 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
U2af1Q9D883 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2af1Q9D883 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.23■□□□□ 0.83
U2af1Q9D883 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC20.23■□□□□ 0.83
U2af1Q9D883 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
U2af1Q9D883 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
U2af1Q9D883 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2af1Q9D883 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
U2af1Q9D883 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
U2af1Q9D883 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
U2af1Q9D883 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
U2af1Q9D883 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
U2af1Q9D883 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
U2af1Q9D883 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
U2af1Q9D883 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
U2af1Q9D883 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
U2af1Q9D883 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
U2af1Q9D883 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.22■□□□□ 0.83
U2af1Q9D883 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.22■□□□□ 0.83
U2af1Q9D883 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
U2af1Q9D883 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
U2af1Q9D883 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
U2af1Q9D883 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
U2af1Q9D883 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.22■□□□□ 0.83
U2af1Q9D883 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
U2af1Q9D883 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
U2af1Q9D883 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 Gm7901-201ENSMUST00000120430 1597 ntBASIC20.21■□□□□ 0.83
U2af1Q9D883 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC20.21■□□□□ 0.83
U2af1Q9D883 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 AC133083.1-201ENSMUST00000221736 2209 ntBASIC20.21■□□□□ 0.83
U2af1Q9D883 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.21■□□□□ 0.83
U2af1Q9D883 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 Gm18246-201ENSMUST00000221023 728 ntBASIC20.21■□□□□ 0.83
U2af1Q9D883 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 AC119177.1-201ENSMUST00000227647 1332 ntBASIC20.21■□□□□ 0.83
U2af1Q9D883 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
U2af1Q9D883 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2af1Q9D883 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2af1Q9D883 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2af1Q9D883 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2af1Q9D883 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2af1Q9D883 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2af1Q9D883 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms