Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim11Q99PQ2 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.59■□□□□ 0.41
Trim11Q99PQ2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim11Q99PQ2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim11Q99PQ2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim11Q99PQ2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim11Q99PQ2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim11Q99PQ2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim11Q99PQ2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim11Q99PQ2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim11Q99PQ2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim11Q99PQ2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trim11Q99PQ2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim11Q99PQ2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim11Q99PQ2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Trim11Q99PQ2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim11Q99PQ2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim11Q99PQ2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim11Q99PQ2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim11Q99PQ2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim11Q99PQ2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.58■□□□□ 0.4
Trim11Q99PQ2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim11Q99PQ2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.58■□□□□ 0.4
Trim11Q99PQ2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim11Q99PQ2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim11Q99PQ2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim11Q99PQ2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim11Q99PQ2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim11Q99PQ2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim11Q99PQ2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim11Q99PQ2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.58■□□□□ 0.4
Trim11Q99PQ2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim11Q99PQ2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim11Q99PQ2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim11Q99PQ2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim11Q99PQ2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim11Q99PQ2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim11Q99PQ2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Trim11Q99PQ2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.57■□□□□ 0.4
Trim11Q99PQ2 Gm12644-201ENSMUST00000119935 606 ntBASIC17.57■□□□□ 0.4
Trim11Q99PQ2 Gm7977-201ENSMUST00000193787 748 ntBASIC17.57■□□□□ 0.4
Trim11Q99PQ2 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.57■□□□□ 0.4
Trim11Q99PQ2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim11Q99PQ2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim11Q99PQ2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim11Q99PQ2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim11Q99PQ2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim11Q99PQ2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Trim11Q99PQ2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim11Q99PQ2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Gm18669-201ENSMUST00000216049 778 ntBASIC17.56■□□□□ 0.4
Trim11Q99PQ2 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim11Q99PQ2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms