Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Gm14140-201ENSMUST00000119999 995 ntBASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Gm7787-201ENSMUST00000216858 688 ntBASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Gtf2ird2Q99NI3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Gm14722-201ENSMUST00000118943 689 ntBASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gtf2ird2Q99NI3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Gtf2ird2Q99NI3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Gtf2ird2Q99NI3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Gtf2ird2Q99NI3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Gtf2ird2Q99NI3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gtf2ird2Q99NI3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gtf2ird2Q99NI3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gtf2ird2Q99NI3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Gtf2ird2Q99NI3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gtf2ird2Q99NI3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gtf2ird2Q99NI3 Asic1-205ENSMUST00000228185 1818 ntBASIC15.82■□□□□ 0.12
Gtf2ird2Q99NI3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gtf2ird2Q99NI3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gtf2ird2Q99NI3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gtf2ird2Q99NI3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Gtf2ird2Q99NI3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gtf2ird2Q99NI3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gtf2ird2Q99NI3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Gtf2ird2Q99NI3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gtf2ird2Q99NI3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gtf2ird2Q99NI3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms