Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1aQ921W0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Gm8520-201ENSMUST00000186517 868 ntBASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Gm5417-201ENSMUST00000079706 384 ntBASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1aQ921W0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Gm10052-201ENSMUST00000168019 960 ntBASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Mir1668-201ENSMUST00000184114 107 ntBASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Gm7729-201ENSMUST00000050143 801 ntBASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1aQ921W0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms