Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm27741-201ENSMUST00000185060 237 ntBASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rpap2Q8VC34 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.89■□□□□ 0.3
Rpap2Q8VC34 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rpap2Q8VC34 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Rpap2Q8VC34 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rpap2Q8VC34 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 AV026068-213ENSMUST00000223675 1171 ntBASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpap2Q8VC34 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpap2Q8VC34 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Gm9682-201ENSMUST00000197505 556 ntBASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.87■□□□□ 0.29
Rpap2Q8VC34 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpap2Q8VC34 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms