Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3a1Q8K4Z5 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sf3a1Q8K4Z5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Gm12350-201ENSMUST00000121208 462 ntBASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Mir5126-201ENSMUST00000175513 77 ntBASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3a1Q8K4Z5 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Gm11764-201ENSMUST00000120221 623 ntBASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Gm18733-201ENSMUST00000173950 856 ntBASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3a1Q8K4Z5 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sf3a1Q8K4Z5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sf3a1Q8K4Z5 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sf3a1Q8K4Z5 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sf3a1Q8K4Z5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sf3a1Q8K4Z5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sf3a1Q8K4Z5 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Gm37153-201ENSMUST00000193637 231 ntBASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.83■□□□□ 0.6
Sf3a1Q8K4Z5 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 Gm13036-201ENSMUST00000117799 748 ntBASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 Gm15590-201ENSMUST00000078419 552 ntBASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms